mzPeakProvenance. PRIDE PXD001283 — the AP-SMALDI mouse urinary-bladder reference (Römpp et al. 2010, Angew. Chem.); the Zenodo 10084132 MSI test suite (DESI colorectal adenoma · LA-ESI Arabidopsis leaf · AP-SMALDI bladder · LTP chilli); Zenodo 18187395 — glioblastoma MALDI phenomics, the multi-optical case (H&E whole-slide + bright-field per section); and the ms-imaging.org Example 1 3×3-pixel pairs (Schramm et al. 2012). All are openly licensed public deposits.
PXD001283-HR2MSI-urinary-bladderPRIDE PXD001283 · AP-SMALDI 10 µm mouse urinary bladder — the label-free “molecular histology” reference set (Römpp et al. 2010).
- mzpeakHR2MSImouseurinarybladderS096.mzpeak▶ View177.1 MB
- imgHR2MSImouseurinarybladderS096-opticalimage.tif1.5 MB
- csvHR2MSImouseurinarybladderS096-results.csv930 B
- ibdHR2MSImouseurinarybladderS096.ibd777.2 MB
- imzmlHR2MSImouseurinarybladderS096.imzML53.6 MB
- mdREADME.md1.2 KB
example1-continuousms-imaging.org Example 1 (Schramm et al. 2012) · canonical 3×3-pixel continuous imzML — the smallest valid file.
- mzpeakExample_Continuous.mzpeak▶ View276.2 KB
- ibdExample_Continuous.ibd328.1 KB
- imzmlExample_Continuous.imzML22.6 KB
- mdREADME.md846 B
example1-processedms-imaging.org Example 1 (Schramm et al. 2012) · canonical 3×3-pixel processed imzML.
- mzpeakExample_Processed.mzpeak▶ View276.2 KB
- ibdExample_Processed.ibd590.6 KB
- imzmlExample_Processed.imzML22.6 KB
- mdREADME.md838 B
zenodo-18187395-GBM-multimodalZenodo 18187395 · glioblastoma MALDI phenomics — the multi-optical case: H&E whole-slide (.svs) + bright-field (.tif) per section.
- mzpeak24_Test_P15_r2/imzml/Test_P15_r2.mzpeak▶ View74.5 MB
- img24_Test_P15_r2/HE-XML/P1_patientset2_102524_104850_aperioID1010549.svs164.6 MB
- xml24_Test_P15_r2/HE-XML/P1_patientset2_102524_104850_aperioID1010549.xml1.4 MB
- img24_Test_P15_r2/imzml/Test_P15_r2.embedded-image_0000.tif26.7 MB
- img24_Test_P15_r2/imzml/Test_P15_r2.embedded-image_0001.svs164.6 MB
- ibd24_Test_P15_r2/imzml/Test_P15_r2.ibd51.9 MB
- imzml24_Test_P15_r2/imzml/Test_P15_r2.imzML6.6 MB
- img24_Test_P15_r2/Optical/Patientset2_Rep2_0001.tif26.7 MB
- xlsx24_Test_P15_r2/TM/Test_P15_r2.xlsx877.8 KB
- mdREADME.md2.7 KB
zenodo-AP-SMALDIZenodo 10084132 · AP-SMALDI mouse urinary bladder (same specimen as PXD001283, re-deposited).
- mzpeakimzML_AP_SMALDI/HR2MSImouseurinarybladderS096.mzpeak▶ View177.1 MB
- imgimzML_AP_SMALDI/HR2MSImouseurinarybladderS096-opticalimage.tif1.5 MB
- csvimzML_AP_SMALDI/HR2MSImouseurinarybladderS096-results.csv930 B
- ibdimzML_AP_SMALDI/HR2MSImouseurinarybladderS096.ibd777.2 MB
- imzmlimzML_AP_SMALDI/HR2MSImouseurinarybladderS096.imzML53.6 MB
- mdREADME.md1.2 KB
zenodo-DESIZenodo 10084132 · DESI imaging of colorectal-adenoma tissue (7 sections / cores).
- mzpeakimzML_DESI/ColAd_Individual/120TopL, 90TopR, 110BottomL, 100BottomR/120TopL, 90TopR, 110BottomL, 100BottomR-centroid.mzpeak▶ View30.9 MB
- mzpeakimzML_DESI/ColAd_Individual/160TopL, 130TopR, 150BottomL, 140BottomR/160TopL,130TopR,150BottomL,140BottomR-centroid.mzpeak▶ View24.5 MB
- mzpeakimzML_DESI/ColAd_Individual/200TopL, 170TopR, 190BottomL, 180BottomR/200TopL, 170TopR, 190BottomL, 180BottomR-centroid.mzpeak▶ View23.7 MB
- mzpeakimzML_DESI/ColAd_Individual/240TopL, 210TopR, 230BottomL, 220BottomR/240TopL, 210TopR, 230BottomL, 220BottomR-centroid.mzpeak▶ View35.8 MB
- mzpeakimzML_DESI/ColAd_Individual/280TopL, 250TopR, 270BottomL, 260BottomR/280TopL, 250TopR, 270BottomL, 260BottomR-centroid.mzpeak▶ View37.4 MB
- mzpeakimzML_DESI/ColAd_Individual/40TopL,10TopR,30BottomL,20BottomR/40TopL,10TopR,30BottomL,20BottomR-centroid.mzpeak▶ View34.5 MB
- mzpeakimzML_DESI/ColAd_Individual/80TopL, 50TopR, 70BottomL, 60BottomR/80TopL, 50TopR, 70BottomL, 60BottomR-centroid.mzpeak▶ View36.5 MB
- ibdimzML_DESI/ColAd_Individual/120TopL, 90TopR, 110BottomL, 100BottomR/120TopL, 90TopR, 110BottomL, 100BottomR-centroid.ibd55.7 MB
- imzmlimzML_DESI/ColAd_Individual/120TopL, 90TopR, 110BottomL, 100BottomR/120TopL, 90TopR, 110BottomL, 100BottomR-centroid.imzML28.0 MB
- imgimzML_DESI/ColAd_Individual/120TopL, 90TopR, 110BottomL, 100BottomR/90,100,110,120.jpg392.8 KB
- imgimzML_DESI/ColAd_Individual/160TopL, 130TopR, 150BottomL, 140BottomR/130,140,150,160.jpg323.1 KB
- ibdimzML_DESI/ColAd_Individual/160TopL, 130TopR, 150BottomL, 140BottomR/160TopL,130TopR,150BottomL,140BottomR-centroid.ibd42.9 MB
- imzmlimzML_DESI/ColAd_Individual/160TopL, 130TopR, 150BottomL, 140BottomR/160TopL,130TopR,150BottomL,140BottomR-centroid.imzML30.2 MB
- imgimzML_DESI/ColAd_Individual/200TopL, 170TopR, 190BottomL, 180BottomR/170,180,190,200.jpg376.6 KB
- ibdimzML_DESI/ColAd_Individual/200TopL, 170TopR, 190BottomL, 180BottomR/200TopL, 170TopR, 190BottomL, 180BottomR-centroid.ibd41.9 MB
- imzmlimzML_DESI/ColAd_Individual/200TopL, 170TopR, 190BottomL, 180BottomR/200TopL, 170TopR, 190BottomL, 180BottomR-centroid.imzML26.0 MB
- imgimzML_DESI/ColAd_Individual/240TopL, 210TopR, 230BottomL, 220BottomR/210,220,230,240.jpg383.2 KB
- ibdimzML_DESI/ColAd_Individual/240TopL, 210TopR, 230BottomL, 220BottomR/240TopL, 210TopR, 230BottomL, 220BottomR-centroid.ibd65.0 MB
- imzmlimzML_DESI/ColAd_Individual/240TopL, 210TopR, 230BottomL, 220BottomR/240TopL, 210TopR, 230BottomL, 220BottomR-centroid.imzML31.3 MB
- imgimzML_DESI/ColAd_Individual/280TopL, 250TopR, 270BottomL, 260BottomR/250,260,270,280.jpg387.3 KB
- ibdimzML_DESI/ColAd_Individual/280TopL, 250TopR, 270BottomL, 260BottomR/280TopL, 250TopR, 270BottomL, 260BottomR-centroid.ibd68.1 MB
- imzmlimzML_DESI/ColAd_Individual/280TopL, 250TopR, 270BottomL, 260BottomR/280TopL, 250TopR, 270BottomL, 260BottomR-centroid.imzML31.3 MB
- imgimzML_DESI/ColAd_Individual/40TopL,10TopR,30BottomL,20BottomR/10,20,30,40.jpg366.2 KB
- ibdimzML_DESI/ColAd_Individual/40TopL,10TopR,30BottomL,20BottomR/40TopL,10TopR,30BottomL,20BottomR-centroid.ibd63.0 MB
- imzmlimzML_DESI/ColAd_Individual/40TopL,10TopR,30BottomL,20BottomR/40TopL,10TopR,30BottomL,20BottomR-centroid.imzML27.8 MB
- imgimzML_DESI/ColAd_Individual/80TopL, 50TopR, 70BottomL, 60BottomR/50,60,70,80.jpg362.2 KB
- ibdimzML_DESI/ColAd_Individual/80TopL, 50TopR, 70BottomL, 60BottomR/80TopL, 50TopR, 70BottomL, 60BottomR-centroid.ibd66.3 MB
- imzmlimzML_DESI/ColAd_Individual/80TopL, 50TopR, 70BottomL, 60BottomR/80TopL, 50TopR, 70BottomL, 60BottomR-centroid.imzML29.1 MB
- mdREADME.md1.9 KB
zenodo-LA-ESIZenodo 10084132 · laser-ablation ESI of an Arabidopsis leaf + pre-ablation optical image.
- mzpeakimzML_LA-ESI/180817_NEG_Thaliana_Leaf_bottom_1_0841.mzpeak▶ View85.4 MB
- ibdimzML_LA-ESI/180817_NEG_Thaliana_Leaf_bottom_1_0841.ibd543.9 MB
- imzmlimzML_LA-ESI/180817_NEG_Thaliana_Leaf_bottom_1_0841.imzML2.2 MB
- imgimzML_LA-ESI/180817_Thaliana_leaf_bottom_1_0840_preabl_polX30.tif5.6 MB
- mdREADME.md1.0 KB
zenodo-LTPZenodo 10084132 · low-temperature-plasma (LTP) MSI of a chilli sample.
- mzpeakimzML_LTP/ltpmsi-chilli.mzpeak▶ View151.3 MB
- imgimzML_LTP/130704_IMGCHJ2.jpg288.6 KB
- imgimzML_LTP/CHJ2.png350.4 KB
- ibdimzML_LTP/ltpmsi-chilli.ibd352.7 MB
- imzmlimzML_LTP/ltpmsi-chilli.imzML11.1 MB
- orig-pimzML_LTP/ltpmsi-chilli.imzML.orig-published-checksum11.1 MB
- mdREADME.md2.9 KB
