TOF Grid-Profile

Provenance. QTOF runs acquired in SWATH/DIA (grid/window) mode, the 2-D m/z × scan structure the grid encoding targets. SCIEX TripleTOF 6600 SWATH from PRIDE (PXD071869 · PXD011326) and MassIVE (MSV000090684 · MSV000090136 · MSV000093587). Each dataset names its accession; all are openly licensed public deposits.

Size vs vendor RAW (=100%) across 5 dataset(s) > 50 MB · bars = mean, dots = runs.

MSV000090684SCIEX TripleTOF 6600 BioID-SWATH (~5.4 GB)3 files
raw 1.0 GB, mzPeak 706.8 MB (66%)

mzpeak9611_NSMF_CBF_BR1_BioID_20180119_TOF6600_AS13_SWATH.mzpeak▶ View706.8 MB
raw9611_NSMF_CBF_BR1_BioID_20180119_TOF6600_AS13_SWATH.wiff5.6 MB
scan9611_NSMF_CBF_BR1_BioID_20180119_TOF6600_AS13_SWATH.wiff.scan1.0 GB

MSV000093587TripleTOF SWATH3 files
raw 1.0 GB, mzPeak 719.8 MB (68%)

MSV000095995SCIEX ZenoTOF 7600 top-down RNase B, MRM-HR (.wiff+.wiff.scan+.wiff2 from raw/); native SCIEX reader produces the uniform-m/z TOF grid4 files
raw 73.4 MB, mzPeak 48.0 MB (65%)

mzpeak20240826_RNAseB_Reduced_50ngul_1ul_MRM_03.mzpeak▶ View48.0 MB
raw20240826_RNAseB_Reduced_50ngul_1ul_MRM_03.wiff2.1 MB
scan20240826_RNAseB_Reduced_50ngul_1ul_MRM_03.wiff.scan69.0 MB
wiff220240826_RNAseB_Reduced_50ngul_1ul_MRM_03.wiff22.4 MB

PXD011326SCIEX TripleTOF 6600 SWATH (two-file)3 files
raw 1.6 GB, mzPeak 1.0 GB (62%)

mzpeakVD_170826_SWATH_6600_PD_01.mzpeak▶ View1.0 GB
rawVD_170826_SWATH_6600_PD_01.wiff12.5 MB
scanVD_170826_SWATH_6600_PD_01.wiff.scan1.6 GB

PXD071869SCIEX TripleTOF 6600 dual-window SWATH (wiff+scan+wiff2)4 files
raw 2.2 GB, mzPeak 1.8 GB (81%)

📏 TOF Grid-Profile5 datasets · 10.3 GB